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[mget-help] trouble with Data Product/Nasa Ocean Color/L3


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  • From: Sophie Laran <>
  • To:
  • Subject: [mget-help] trouble with Data Product/Nasa Ocean Color/L3
  • Date: Mon, 27 Jan 2020 09:42:05 +0100
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Hello

I'm using MGET on ArcGis and I recently experiment some troubles to use

Create a Climatological raster for NASA oceanColor Lm SMI

It was runing few weeks ago and now I can't, and receive this kind of message below this e-mail.

Could you let me know if it's come from me/my computer or the tool. It's seems that none of the tools from L3 Product work.

Thanks a lot in advance for your answer and for this very nice Tools, so helpfull!!

Best regards

Sophie Laran

Executing (Create Climatological Rasters for NASA OceanColor L3 SMI Product (3)): OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters Aqua Daily 4km POC_poc Mean Cumulative C:\Users\slaran\Documents\2_SIG\SPEEcov\POC Replace %(Sensor)s;%(TemporalResolution)s;%(SpatialResolution)s;%(ProductCode)s;%(ClimatologyBinType)s_Climatology;%(Sensor)s_%(ProductCode)s_%(ClimatologyBinName)s_%(Statistic)s.img # 1 1 # "-5 44.5 -0.6 47" 18/01/2019 15/02/2019 60 300 true false
Start Time: Mon Jan 27 09:23:24 2020
Running script OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters...
Querying cumulative climatological mean of the aqua daily 4km POC_poc from NASA OceanColor, clipped to indices tMin = 6042, tMax = 6070, yMin = 3228, yMax = 3287, xMin = 4200, xMax = 4305.
Query complete: 0:00:00 elapsed, 1 datasets found, 0:00:00.050000 per dataset.
Importing 1 datasets into ArcGIS Folder C:\Users\slaran\Documents\2_SIG\SPEEcov\POC with mode "replace".
Import stopped before all datasets were imported: 0:00:01 elapsed, 0 datasets imported, 0:00:00 per dataset, 1 datasets not imported.
RuntimeError: Failed to open netCDF file c:\users\slaran\appdata\local\temp\arc5df1\GeoEco_OceanColorLevel3SMIFileSearcher_Temp_mzv5vr\A2002185.L3m_DAY_POC_poc_4km.nc (a local copy of A2002185.L3m_DAY_POC_poc_4km.nc from NASA OceanColor data archive). The file may not be in netCDF-3 or netCDF-4 format. Detailed error information: netCDF4.Dataset() reported RuntimeError: NetCDF: Unknown file format.
Failed script OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters...


Traceback (most recent call last):
  File "C:\Program Files\GeoEco\ArcGISToolbox\Scripts\OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters.py", line 5, in <module>
    ExecuteMethodFromCommandLineAsArcGISTool('GeoEco.DataProducts.NASA.OceanColor', 'OceanColorLevel3SMITimeSeries', 'CreateClimatologicalArcGISRasters')
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\ArcGISScripts.py", line 210, in ExecuteMethodFromCommandLineAsArcGISTool
    exec sourceCode in globals(), locals()
  File "<string>", line 1, in <module>
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\DataProducts\NASA\OceanColor.py", line 595, in CreateClimatologicalArcGISRasters
    workspace.ImportDatasets(collection.QueryDatasets(), mode, calculateStatistics=calculateStatistics, buildPyramids=buildPyramids)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 820, in ImportDatasets
    self._ImportDatasets(datasets, mode.lower(), reportProgress, options)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Collections.py", line 695, in _ImportDatasets
    self._ImportDatasetsToPath(pathComponentsForPath[path], datasetsForPath[path], mode, progressReporter, options)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\ArcGIS.py", line 612, in _ImportDatasetsToPath
    self.DatasetType._ImportDatasetsToPath(os.path.join(self.Path, *pathComponents), sourceDatasets, mode, progressReporter, options)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\ArcGIS.py", line 1036, in _ImportDatasetsToPath
    elif dataset.DataType not in ArcGISRaster._GDALDataTypeForNumpyDataType.keys():
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 2673, in _GetDataType
    return self.UnscaledDataType
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 2697, in _GetUnscaledDataType
    return self.GetLazyPropertyValue('UnscaledDataType')
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 160, in GetLazyPropertyValue
    value = self._GetLazyPropertyPhysicalValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py", line 1970, in _GetLazyPropertyPhysicalValue
    if self._Grids[0].DataType == u'float64':
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 2671, in _GetDataType
    if self.DataIsScaled:
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 2692, in _GetDataIsScaled
    return self.GetLazyPropertyValue('ScalingFunction') is not None
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 160, in GetLazyPropertyValue
    value = self._GetLazyPropertyPhysicalValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py", line 563, in _GetLazyPropertyPhysicalValue
    return self._Grid.GetLazyPropertyValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 160, in GetLazyPropertyValue
    value = self._GetLazyPropertyPhysicalValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py", line 913, in _GetLazyPropertyPhysicalValue
    return self._Grid.GetLazyPropertyValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 160, in GetLazyPropertyValue
    value = self._GetLazyPropertyPhysicalValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py", line 277, in _GetLazyPropertyPhysicalValue
    return self._CachedOldestGrid.GetLazyPropertyValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py", line 160, in GetLazyPropertyValue
    value = self._GetLazyPropertyPhysicalValue(name)
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\NetCDF.py", line 348, in _GetLazyPropertyPhysicalValue
    v = self._GetVariable()
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\NetCDF.py", line 723, in _GetVariable
    self.ParentCollection._Open()
  File "C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\NetCDF.py", line 288, in _Open
    raise RuntimeError(_(u'Failed to open %(dn)s. The file may not be in netCDF-3 or netCDF-4 format. Detailed error information: netCDF4.Dataset() reported %(e)s: %(msg)s.') % {u'dn': self._DisplayName, u'e': e.__class__.__name__, u'msg': self._Str(e)})
RuntimeError: Failed to open netCDF file c:\users\slaran\appdata\local\temp\arc5df1\GeoEco_OceanColorLevel3SMIFileSearcher_Temp_mzv5vr\A2002185.L3m_DAY_POC_poc_4km.nc (a local copy of A2002185.L3m_DAY_POC_poc_4km.nc from NASA OceanColor data archive). The file may not be in netCDF-3 or netCDF-4 format. Detailed error information: netCDF4.Dataset() reported RuntimeError: NetCDF: Unknown file format.


Failed to execute (Create Climatological Rasters for NASA OceanColor L3 SMI Product (3)).
Failed at Mon Jan 27 09:23:37 2020 (Elapsed Time: 12,89 seconds)


-- 
Sophie Laran (PhD)
ADERA
Observatoire PELAGIS - UMS 3462
Université de La Rochelle - CNRS
Pôle Analytique - 5 allées de l'Océan
17 000 LA ROCHELLE - FRANCE
TEL : +33 (0)5 16 49 67 15 (LD)
TEL : +33 (0)5 46 44 99 10 (STD)
http://www.observatoire-pelagis.cnrs.fr



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