Subject: Marine Geospatial Ecology Tools (MGET) help
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- From: Sophie Laran <>
- To:
- Subject: [mget-help] trouble with Data Product/Nasa Ocean Color/L3
- Date: Mon, 27 Jan 2020 09:42:05 +0100
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Hello
I'm using MGET on ArcGis and I recently experiment some troubles to use
Create a Climatological raster for NASA oceanColor Lm SMI
It was runing few weeks ago and now I can't, and receive this kind of message below this e-mail.
Could you let me know if it's come from me/my computer or the
tool. It's seems that none of the tools from L3 Product work.
Thanks a lot in advance for your answer and for this very nice
Tools, so helpfull!!
Best regards
Sophie Laran
Executing (Create Climatological Rasters
for NASA OceanColor L3 SMI Product (3)):
OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters
Aqua Daily 4km POC_poc Mean Cumulative
C:\Users\slaran\Documents\2_SIG\SPEEcov\POC Replace
%(Sensor)s;%(TemporalResolution)s;%(SpatialResolution)s;%(ProductCode)s;%(ClimatologyBinType)s_Climatology;%(Sensor)s_%(ProductCode)s_%(ClimatologyBinName)s_%(Statistic)s.img
# 1 1 # "-5 44.5 -0.6 47" 18/01/2019 15/02/2019 60 300 true
false
Start Time: Mon Jan 27 09:23:24 2020
Running script
OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters...
Querying cumulative climatological mean of the aqua daily 4km
POC_poc from NASA OceanColor, clipped to indices tMin = 6042, tMax
= 6070, yMin = 3228, yMax = 3287, xMin = 4200, xMax = 4305.
Query complete: 0:00:00 elapsed, 1 datasets found, 0:00:00.050000
per dataset.
Importing 1 datasets into ArcGIS Folder
C:\Users\slaran\Documents\2_SIG\SPEEcov\POC with mode "replace".
Import stopped before all datasets were imported: 0:00:01 elapsed,
0 datasets imported, 0:00:00 per dataset, 1 datasets not imported.
RuntimeError: Failed to open netCDF file
c:\users\slaran\appdata\local\temp\arc5df1\GeoEco_OceanColorLevel3SMIFileSearcher_Temp_mzv5vr\A2002185.L3m_DAY_POC_poc_4km.nc
(a local copy of A2002185.L3m_DAY_POC_poc_4km.nc from NASA
OceanColor data archive). The file may not be in netCDF-3 or
netCDF-4 format. Detailed error information: netCDF4.Dataset()
reported RuntimeError: NetCDF: Unknown file format.
Failed script
OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters...
Traceback (most recent call last):
File "C:\Program
Files\GeoEco\ArcGISToolbox\Scripts\OceanColorLevel3SMITimeSeriesCreateClimatologicalArcGISRasters.py",
line 5, in <module>
ExecuteMethodFromCommandLineAsArcGISTool('GeoEco.DataProducts.NASA.OceanColor',
'OceanColorLevel3SMITimeSeries',
'CreateClimatologicalArcGISRasters')
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\ArcGISScripts.py",
line 210, in ExecuteMethodFromCommandLineAsArcGISTool
exec sourceCode in globals(), locals()
File "<string>", line 1, in <module>
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\DataProducts\NASA\OceanColor.py",
line 595, in CreateClimatologicalArcGISRasters
workspace.ImportDatasets(collection.QueryDatasets(), mode,
calculateStatistics=calculateStatistics,
buildPyramids=buildPyramids)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 820, in ImportDatasets
self._ImportDatasets(datasets, mode.lower(), reportProgress,
options)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Collections.py",
line 695, in _ImportDatasets
self._ImportDatasetsToPath(pathComponentsForPath[path],
datasetsForPath[path], mode, progressReporter, options)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\ArcGIS.py",
line 612, in _ImportDatasetsToPath
self.DatasetType._ImportDatasetsToPath(os.path.join(self.Path,
*pathComponents), sourceDatasets, mode, progressReporter,
options)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\ArcGIS.py",
line 1036, in _ImportDatasetsToPath
elif dataset.DataType not in
ArcGISRaster._GDALDataTypeForNumpyDataType.keys():
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 2673, in _GetDataType
return self.UnscaledDataType
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 2697, in _GetUnscaledDataType
return self.GetLazyPropertyValue('UnscaledDataType')
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 160, in GetLazyPropertyValue
value = self._GetLazyPropertyPhysicalValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py",
line 1970, in _GetLazyPropertyPhysicalValue
if self._Grids[0].DataType == u'float64':
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 2671, in _GetDataType
if self.DataIsScaled:
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 2692, in _GetDataIsScaled
return self.GetLazyPropertyValue('ScalingFunction') is not
None
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 160, in GetLazyPropertyValue
value = self._GetLazyPropertyPhysicalValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py",
line 563, in _GetLazyPropertyPhysicalValue
return self._Grid.GetLazyPropertyValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 160, in GetLazyPropertyValue
value = self._GetLazyPropertyPhysicalValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py",
line 913, in _GetLazyPropertyPhysicalValue
return self._Grid.GetLazyPropertyValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 160, in GetLazyPropertyValue
value = self._GetLazyPropertyPhysicalValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\Virtual.py",
line 277, in _GetLazyPropertyPhysicalValue
return self._CachedOldestGrid.GetLazyPropertyValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\__init__.py",
line 160, in GetLazyPropertyValue
value = self._GetLazyPropertyPhysicalValue(name)
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\NetCDF.py",
line 348, in _GetLazyPropertyPhysicalValue
v = self._GetVariable()
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\NetCDF.py",
line 723, in _GetVariable
self.ParentCollection._Open()
File
"C:\Python27\ArcGIS10.6\lib\site-packages\GeoEco\Datasets\NetCDF.py",
line 288, in _Open
raise RuntimeError(_(u'Failed to open %(dn)s. The file may
not be in netCDF-3 or netCDF-4 format. Detailed error
information: netCDF4.Dataset() reported %(e)s: %(msg)s.') %
{u'dn': self._DisplayName, u'e': e.__class__.__name__, u'msg':
self._Str(e)})
RuntimeError: Failed to open netCDF file
c:\users\slaran\appdata\local\temp\arc5df1\GeoEco_OceanColorLevel3SMIFileSearcher_Temp_mzv5vr\A2002185.L3m_DAY_POC_poc_4km.nc
(a local copy of A2002185.L3m_DAY_POC_poc_4km.nc from NASA
OceanColor data archive). The file may not be in netCDF-3 or
netCDF-4 format. Detailed error information: netCDF4.Dataset()
reported RuntimeError: NetCDF: Unknown file format.
Failed to execute (Create Climatological Rasters for NASA
OceanColor L3 SMI Product (3)).
Failed at Mon Jan 27 09:23:37 2020 (Elapsed Time: 12,89 seconds)
-- Sophie Laran (PhD) ADERA Observatoire PELAGIS - UMS 3462 Université de La Rochelle - CNRS Pôle Analytique - 5 allées de l'Océan 17 000 LA ROCHELLE - FRANCE TEL : +33 (0)5 16 49 67 15 (LD) TEL : +33 (0)5 46 44 99 10 (STD) http://www.observatoire-pelagis.cnrs.fr
- [mget-help] trouble with Data Product/Nasa Ocean Color/L3, Sophie Laran, 01/27/2020
- Message not available
- RE: [mget-help] trouble with Data Product/Nasa Ocean Color/L3, Jason Roberts, 01/27/2020
- Re: [mget-help] trouble with Data Product/Nasa Ocean Color/L3, Sophie Laran, 01/29/2020
- RE: [mget-help] trouble with Data Product/Nasa Ocean Color/L3, Jason Roberts, 01/27/2020
- Message not available
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